(Q28044579)

Simona Lodato

3

0 references

Loyal Goff

Loyal A Goff

2

0 references

Boyan Bonev

Boyan Bonev

4

0 references

Martin Sauvageau

Martin Sauvageau

1

0 references

David Frendewey

David Frendewey

20

0 references

John L. Rinn

John L Rinn

25

0 references

Ronald P. Hart

Ronald P Hart

22

0 references

Paola Arlotta

24

Paola Arlotta

0 references

author name string

Abigail F Groff

5

0 references

Chiara Gerhardinger

6

0 references

Diana B Sanchez-Gomez

7

0 references

Ezgi Hacisuleyman

8

0 references

Eric Li

9

0 references

Matthew Spence

10

0 references

Stephen C Liapis

11

0 references

William Mallard

12

0 references

Michael Morse

13

0 references

Mavis R Swerdel

14

0 references

Michael F D'Ecclessis

15

0 references

Jennifer C Moore

16

0 references

Venus Lai

17

0 references

Guochun Gong

18

0 references

George D Yancopoulos

19

0 references

David M Valenzuela

describes a project that uses

23

0 references

language of work or name

English

0 references

publication date

31 December 2013

0 references

published in

eLife

0 references

volume

2

0 references

page(s)

e01749

0 references

ImageJ

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3874104/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult

20 March 2017

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20 March 2017

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20 March 2017

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RORβ induces barrel-like neuronal clusters in the developing neocortex

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20 March 2017

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20 March 2017

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20 March 2017

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Comparative genomics search for losses of long-established genes on the human lineage

20 March 2017

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Haploinsufficiency of the forkhead gene Foxf1, a target for sonic hedgehog signaling, causes lung and foregut malformations

20 March 2017

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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

20 March 2017

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High-throughput engineering of the mouse genome coupled with high-resolution expression analysis

20 March 2017

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Too many roads not taken

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Changes in the visual system of monocularly sutured or enucleated cats demonstrable with cytochrome oxidase histochemistry

20 March 2017

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The T-box transcription factor Eomes/Tbr2 regulates neurogenesis in the cortical subventricular zone

20 March 2017

1 reference

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Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex

20 March 2017

1 reference

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Neuronal subtype-specific genes that control corticospinal motor neuron development in vivo

20 March 2017

1 reference

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Brn-1 and Brn-2 share crucial roles in the production and positioning of mouse neocortical neurons

20 March 2017

1 reference

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Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice

20 March 2017

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An evolving NGF-Hoxd1 signaling pathway mediates development of divergent neural circuits in vertebrates

20 March 2017

1 reference

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Increased expression of angiogenic genes in the brains of mouse meg3-null embryos

20 March 2017

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Tbr2 directs conversion of radial glia into basal precursors and guides neuronal amplification by indirect neurogenesis in the developing neocortex

20 March 2017

1 reference

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Fezl is required for the birth and specification of corticospinal motor neurons

20 March 2017

1 reference

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Deletion of the H19 transcription unit reveals the existence of a putative imprinting control element

20 March 2017

1 reference

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Mice homozygous for a targeted disruption of Hoxd-3 (Hox-4.1) exhibit anterior transformations of the first and second cervical vertebrae, the atlas and the axis

20 March 2017

1 reference

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

20 March 2017

1 reference

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Differential analysis of gene regulation at transcript resolution with RNA-seq

7 April 2017

1 reference

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A map of the cis-regulatory sequences in the mouse genome

7 April 2017

1 reference

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lincRNAs act in the circuitry controlling pluripotency and differentiation

7 April 2017

1 reference

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A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

7 April 2017

1 reference

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Long noncoding RNAs with enhancer-like function in human cells

7 April 2017

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Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

7 April 2017

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Evolution and functions of long noncoding RNAs

7 April 2017

1 reference

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Neuronal subtype specification in the cerebral cortex

7 April 2017

1 reference

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Pax6, Tbr2, and Tbr1 are expressed sequentially by radial glia, intermediate progenitor cells, and postmitotic neurons in developing neocortex

7 April 2017

1 reference

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Modular regulatory principles of large non-coding RNAs

7 April 2017

1 reference

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lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs.

7 April 2017

1 reference

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lincRNAs: genomics, evolution, and mechanisms

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Promoter directionality is controlled by U1 snRNP and polyadenylation signals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Structure and function of long noncoding RNAs in epigenetic regulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-γ locus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Long noncoding RNAs regulate adipogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Evolutionary dynamics of gene and isoform regulation in Mammalian tissues.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Small noncoding differentially methylated copy-number variants, including lncRNA genes, cause a lethal lung developmental disorder

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

POU-III transcription factors (Brn1, Brn2, and Oct6) influence neurogenesis, molecular identity, and migratory destination of upper-layer cells of the cerebral cortex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

LincRNA-p21 suppresses target mRNA translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Imaging individual mRNA molecules using multiple singly labeled probes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

The functional organization of the barrel cortex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Transcriptional noise and the fidelity of initiation by RNA polymerase II.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

F0 generation mice fully derived from gene-targeted embryonic stem cells allowing immediate phenotypic analyses

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Bidirectional expression of CUG and CAG expansion transcripts and intranuclear polyglutamine inclusions in spinocerebellar ataxia type 8.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Transcriptional regulation of cortical neuron migration by POU domain factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Cortical upper layer neurons derive from the subventricular zone as indicated by Svet1 gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Hybrid vigor, fetal overgrowth, and viability of mice derived by nuclear cloning and tetraploid embryo complementation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Differential distribution of the glutamate transporters GLT-1 and GLAST in tanycytes of the third ventricle

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Transcripts of Grg4, a murine groucho-related gene, are detected in adjacent tissues to other murine neurogenic gene homologues during embryonic development.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Structure of layer IV in the somatosensory neocortex of the rat: description and comparison with the mouse

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Cytochrome oxidase staining in the rat SmI barrel cortex.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Molecular biology: RNA discrimination

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Cux-2 controls the proliferation of neuronal intermediate precursors of the cortical subventricular zone.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Dynamics of Cux2 expression suggests that an early pool of SVZ precursors is fated to become upper cortical layer neurons.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874104

Application of lacZ transgenic mice to cell lineage studies

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24381249