(Q34985911)

24028551

5 August 2017

title

Contrasted evolutionary histories of two Toll-like receptors (Tlr4 and Tlr7) in wild rodents (MURINAE). (English)

1 reference

5 August 2017

0 references

2

1 reference

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13 June 2020

Maxime Galan

4

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13 June 2020

Serge Morand

7

1 reference

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13 June 2020

Nathalie Charbonnel

8

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13 June 2020

Josef Bryja

9

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13 June 2020

Jean-François Cosson

10

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13 June 2020

5

Emmanuelle Jousselin

1 reference

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13 June 2020

author name string

Alena Fornůsková

1

1 reference

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13 June 2020

Marie Pagès

3

1 reference

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13 June 2020

Frederique Cerqueira

6

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13 June 2020

language of work or name

1 reference

12 September 2013

1 reference

24028551

5 August 2017

published in

BMC Evolutionary Biology

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13 June 2020

volume

13

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13 June 2020

page(s)

194

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Recognition of lipid A variants by the TLR4-MD-2 receptor complex

13 June 2020

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Structural basis of species-specific endotoxin sensing by innate immune receptor TLR4/MD-2

8 July 2018

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Signatures of positive selection in Toll-like receptor (TLR) genes in mammals

8 July 2018

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Multiple geographic origins of commensalism and complex dispersal history of Black Rats

8 July 2018

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Comparative analysis of species-specific ligand recognition in Toll-like receptor 8 signaling: a hypothesis

8 July 2018

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Molecular evolution of the vertebrate TLR1 gene family--a complex history of gene duplication, gene conversion, positive selection and co-evolution

8 July 2018

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Immune signaling by RIG-I-like receptors

8 July 2018

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Structural biology of the Toll-like receptor family

8 July 2018

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

8 July 2018

1 reference

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The structural biology of Toll-like receptors

8 July 2018

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Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection

8 July 2018

1 reference

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Molecular evolution of the toll-like receptor multigene family in birds.

8 July 2018

1 reference

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Genetic structure and contrasting selection pattern at two major histocompatibility complex genes in wild house mouse populations

8 July 2018

1 reference

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Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

8 July 2018

1 reference

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Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

8 July 2018

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LRRfinder: a web application for the identification of leucine-rich repeats and an integrative Toll-like receptor database.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Adaptation and constraint at Toll-like receptors in primates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

The role of pattern-recognition receptors in innate immunity: update on Toll-like receptors

8 July 2018

1 reference

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Jane: a new tool for the cophylogeny reconstruction problem

8 July 2018

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From evolutionary genetics to human immunology: how selection shapes host defence genes

8 July 2018

1 reference

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AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses

8 July 2018

1 reference

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Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense

8 July 2018

1 reference

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Homology modeling of human Toll-like receptors TLR7, 8, and 9 ligand-binding domains

8 July 2018

1 reference

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Natural selection and phylogenetic analysis

8 July 2018

1 reference

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DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

8 July 2018

1 reference

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Essential roles of hydrophobic residues in both MD-2 and toll-like receptor 4 in activation by endotoxin

8 July 2018

1 reference

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The structural basis of lipopolysaccharide recognition by the TLR4-MD-2 complex

8 July 2018

1 reference

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Protein structure prediction on the Web: a case study using the Phyre server

8 July 2018

1 reference

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Variation matters: TLR structure and species-specific pathogen recognition

8 July 2018

1 reference

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The role of innate immune responses in autoimmune disease development

8 July 2018

1 reference

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Systems biology of innate immunity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

A rapid bootstrap algorithm for the RAxML Web servers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Searching protein structure databases with DaliLite v.3

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Unique properties of the chicken TLR4/MD-2 complex: selective lipopolysaccharide activation of the MyD88-dependent pathway

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Phylogeny and biogeography of African Murinae based on mitochondrial and nuclear gene sequences, with a new tribal classification of the subfamily

8 July 2018

1 reference

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Development of TLR inhibitors for the treatment of autoimmune diseases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Elucidation of the MD-2/TLR4 interface required for signaling by lipid IVa.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Functional diversification of the toll-like receptor gene family

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

jModelTest: phylogenetic model averaging

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Global trends in emerging infectious diseases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Evolution of the chicken Toll-like receptor gene family: a story of gene gain and gene loss

8 July 2018

1 reference

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Toll-like receptors--taking an evolutionary approach

8 July 2018

1 reference

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Nucleotide variation in wild and inbred mice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Toll-like receptors 7, 8, and 9: linking innate immunity to autoimmunity

8 July 2018

1 reference

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TLR4 polymorphisms, infectious diseases, and evolutionary pressure during migration of modern humans

8 July 2018

1 reference

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Crystal structure of the TLR4-MD-2 complex with bound endotoxin antagonist Eritoran

8 July 2018

1 reference

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Genome bioinformatic analysis of nonsynonymous SNPs

8 July 2018

1 reference

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Innate immunogenetics: a tool for exploring new frontiers of host defence

8 July 2018

1 reference

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Translational mini-review series on Toll-like receptors: networks regulated by Toll-like receptors mediate innate and adaptive immunity

8 July 2018

1 reference

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Immunobiology of Toll-like receptors: emerging trends

8 July 2018

1 reference

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Pathogen recognition and innate immunity

8 July 2018

1 reference

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Duplication, balancing selection and trans-species evolution explain the high levels of polymorphism of the DQA MHC class II gene in voles (Arvicolinae).

8 July 2018

1 reference

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The evolutionary ecology of the major histocompatibility complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

The evolution of vertebrate Toll-like receptors

8 July 2018

1 reference

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Evasion of Toll-like receptor 5 by flagellated bacteria

8 July 2018

1 reference

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Single nucleotide polymorphisms of Toll-like receptors and susceptibility to infectious disease

8 July 2018

1 reference

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Datamonkey: rapid detection of selective pressure on individual sites of codon alignments

8 July 2018

1 reference

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The acquired immune system: a vantage from beneath

8 July 2018

1 reference

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TLRs: Professor Mechnikov, sit on your hat.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Phase and antigenic variation in bacteria

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

High MHC diversity maintained by balancing selection in an otherwise genetically monomorphic mammal

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Species-specific recognition of single-stranded RNA via toll-like receptor 7 and 8

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Innate antiviral responses by means of TLR7-mediated recognition of single-stranded RNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Toll-like receptors and acquired immunity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

MHC studies in nonmodel vertebrates: what have we learned about natural selection in 15 years?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

A comparison of bayesian methods for haplotype reconstruction from population genotype data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Role of Toll-like receptors in pathogen recognition.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Lipopolysaccharide endotoxins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

MRBAYES: Bayesian inference of phylogenetic trees

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Phylogenetic variation and polymorphism at the toll-like receptor 4 locus (TLR4)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Primer3 on the WWW for general users and for biologist programmers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Defective LPS Signaling in C3H/HeJ and C57BL/10ScCr Mice: Mutations in Tlr4 Gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

SMART, a simple modular architecture research tool: identification of signaling domains

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

A human homologue of the Drosophila Toll protein signals activation of adaptive immunity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

The nature of selection on the major histocompatibility complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

The effect of deleterious mutations on neutral molecular variation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

A comparison of bats and rodents as reservoirs of zoonotic viruses: are bats special?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Cytonuclear discordance among Southeast Asian black rats (Rattus rattus complex).

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Invasion facilitates hybridization with introgression in the Rattus rattus species complex

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Molecular evolution of vertebrate Toll-like receptors: evolutionary rate difference between their leucine-rich repeats and their TIR domains

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Contrasting patterns of diversity and population differentiation at the innate immunity gene toll-like receptor 2 (TLR2) in two sympatric rodent species.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Evolution of the TIR domain-containing adaptors in humans: swinging between constraint and adaptation

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Signatures of selection acting on the innate immunity gene Toll-like receptor 2 (TLR2) during the evolutionary history of rodents.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

The differential evolutionary dynamics of avian cytokine and TLR gene classes

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Identification of the first Toll-like receptor gene in passerine birds: TLR4 orthologue in zebra finch (Taeniopygia guttata).

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

How well do evolutionary trees describe genetic relationships among populations?

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Characterization of bovine Toll-like receptor 8: ligand specificity, signaling essential sites and dimerization

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

GARD: a genetic algorithm for recombination detection

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Automated phylogenetic detection of recombination using a genetic algorithm.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Within-species flagellin polymorphism in Xanthomonas campestris pv campestris and its impact on elicitation of Arabidopsis FLAGELLIN SENSING2-dependent defenses

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Nucleotide-binding oligomerization domain-2 modulates specific TLR pathways for the induction of cytokine release

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3848458

Gene trees and species trees are not the same

26 October 2018

1 reference

12 December 2020

Toll pathway-dependent blockade of CD4+CD25+ T cell-mediated suppression by dendritic cells

1 reference

12 December 2020

Is MHC enough for understanding wildlife immunogenetics?

1 reference

12 December 2020

Polymorphisms at the innate immune receptor TLR2 are associated with Borrelia infection in a wild rodent population

1 reference

12 December 2020

INFERRING PHYLOGENIES FROM mtDNA VARIATION: MITOCHONDRIAL-GENE TREES VERSUS NUCLEAR-GENE TREES.

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2148-13-194

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24028551%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

13 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24028551%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

24028551

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24028551%20AND%20SRC:MED&resulttype=core&format=json