(Q38672007)

5 September 2017

title

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life (English)

1 reference

Erratum: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

5 September 2017

corrigendum / erratum

1 reference

12 July 2019

http://api.crossref.org/works?select=update-to&filter=doi:10.1038/NBT0418-368C

author

Markus Göker

6

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5 September 2017

12

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5 September 2017

21

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5 September 2017

20

Hans-Peter Klenk

0 references

Philip Hugenholtz

16

Philip Hugenholtz

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Tanja Woyke

19

Tanja Woyke

0 references

David Paez-Espino

David Paez-Espino

10

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Jan P. Meier-Kolthoff

Jan P Meier-Kolthoff

5

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William B. Whitman

William B Whitman

13

0 references

Jonathan A. Eisen

Jonathan A Eisen

15

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Supratim Mukherjee

Supratim Mukherjee

1

0 references

Amrita Pati

17

Amrita Pati

1 reference

5 September 2017

14

George M Garrity

1 reference

5 September 2017

18

Natalia N Ivanova

1 reference

5 September 2017

Emiley A Eloe-Fadrosh

4

Emiley A Eloe-Fadrosh

1 reference

5 September 2017

Georgios A. Pavlopoulos

9

Georgios A Pavlopoulos

1 reference

5 September 2017

2

Rekha Seshadri

1 reference

5 September 2017

3

Neha J Varghese

1 reference

5 September 2017

7

R Cameron Coates

1 reference

5 September 2017

8

Michalis Hadjithomas

1 reference

5 September 2017

11

Yasuo Yoshikuni

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5 September 2017

publication date

12 June 2017

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5 September 2017

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5 September 2017

volume

35

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5 September 2017

issue

7

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5 September 2017

page(s)

676-683

1 reference

Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements

5 September 2017

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Divorcing Strain Classification from Species Names

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7 January 2021

En route to a genome-based classification of Archaea and Bacteria?

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7 January 2021

International Code of Nomenclature of Prokaryotes. Prokaryotic Code (2008 Revision)

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7 January 2021

A New Genomics-Driven Taxonomy of Bacteria and Archaea: Are We There Yet?

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Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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Common themes and variations in the rhodanese superfamily

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Metagenomic Analysis Indicates Epsilonproteobacteria as a Potential Cause of Microbial Corrosion in Pipelines Injected with Bisulfite

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Kinetics and strain specificity of rhizosphere and endophytic colonization by enteric bacteria on seedlings of Medicago sativa and Medicago truncatula.

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Conservation of Salmonella infection mechanisms in plants and animals

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7 January 2021

Complete genome sequence of Treponema succinifaciens type strain (6091).

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7 January 2021

Subsistence strategies in traditional societies distinguish gut microbiomes

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7 January 2021

Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24).

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7 January 2021

The Amazon continuum dataset: quantitative metagenomic and metatranscriptomic inventories of the Amazon River plume, June 2010

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7 January 2021

Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022)

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7 January 2021

Proteogenomic analysis of a thermophilic bacterial consortium adapted to deconstruct switchgrass

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system.

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7 January 2021

Discovery of Reactive Microbiota-Derived Metabolites that Inhibit Host Proteases

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7 January 2021

Bioprospecting metagenomes: glycosyl hydrolases for converting biomass

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7 January 2021

Characterization of a metagenome-derived halotolerant cellulase.

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7 January 2021

Objective: biochemical function

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7 January 2021

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

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7 January 2021

The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation

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7 January 2021

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

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7 January 2021

ALLPATHS: de novo assembly of whole-genome shotgun microreads

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7 January 2021

The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)

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7 January 2021

Toward a standard in structural genome annotation for prokaryotes

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7 January 2021

Prodigal: prokaryotic gene recognition and translation initiation site identification

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7 January 2021

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

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7 January 2021

Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs

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7 January 2021

Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions

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7 January 2021

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7 January 2021

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7 January 2021

The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).

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7 January 2021

kClust: fast and sensitive clustering of large protein sequence databases

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7 January 2021

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

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7 January 2021

Adaptive seeds tame genomic sequence comparison

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7 January 2021

Highly parallelized inference of large genome-based phylogenies

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7 January 2021

Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences

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7 January 2021

BLAST+: architecture and applications

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7 January 2021

FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program

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7 January 2021

Novel diagnostic algorithm for identification of mycobacteria using genus-specific amplification of the 16S-23S rRNA gene spacer and restriction endonucleases.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28604660

12 December 2020

inferred from PubMed ID database lookup

Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28604660

12 December 2020

inferred from PubMed ID database lookup

PAS domains: internal sensors of oxygen, redox potential, and light

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28604660

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/NBT.3886

1 reference

5 September 2017

1 reference