(Q40728109)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

title

The chloroplast genome of the hexaploid Spartina maritima (Poaceae, Chloridoideae): Comparative analyses and molecular dating (English)

1 reference

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19 February 2020

1 reference

Spartina maritima

1 reference

based on heuristic

inferred from title

author

Mathieu Rousseau-Gueutin

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

author name string

S Bellot

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

G E Martin

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

J Boutte

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

H Chelaifa

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

O Lima

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

S Michon-Coudouel

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

D Naquin

8

1 reference

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19 February 2020

A Salmon

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

K Ainouche

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

M Ainouche

11

1 reference

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19 February 2020

publication date

13 July 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26182838%20AND%20SRC:MED&resulttype=core&format=json

Molecular Phylogenetics and Evolution

19 February 2020

number of pages

12

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based on heuristic

inferred from page(s)

published in

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19 February 2020

volume

93

1 reference

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19 February 2020

page(s)

5-16

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Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae)

19 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

New grass phylogeny resolves deep evolutionary relationships and discovers C4 origins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Molecular phylogeny of hybridizing species from the genus Spartina Schreb. (Poaceae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Recent loss of plastid-encoded ndh genes within Erodium (Geraniaceae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Large multi-gene phylogenetic trees of the grasses (Poaceae): progress towards complete tribal and generic level sampling

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Biogeography of the grasses (Poaceae): a phylogenetic approach to reveal evolutionary history in geographical space and geological time

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Biogeography and phylogenomics of New World Bambusoideae (Poaceae), revisited

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Instability of repetitive DNA sequences: the role of replication in multiple mechanisms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The production of hybrids with high ecological amplitude between exotic Spartina densiflora and native S. maritima in the Iberian Peninsula

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Oligocene CO2 decline promoted C4 photosynthesis in grasses.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Molecular dating, evolutionary rates, and the age of the grasses.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The Complete Chloroplast Genome Sequence of Pelargonium x hortorum: Organization and Evolution of the Largest and Most Highly Rearranged Chloroplast Genome of Land Plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Dating the origins of polyploidy events

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The two largest chloroplast genome-encoded open reading frames of higher plants are essential genes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Bayesian phylogenetics with BEAUti and the BEAST 1.7

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Convergent phylogenetic and functional responses to altered fire regimes in mesic savanna grasslands of North America and South Africa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Evolutionary dynamics of Waxy and the origin of hexaploid Spartina species (Poaceae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The enigmatic invasive Spartina densiflora: a history of hybridizations in a polyploidy context

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Implications of the plastid genome sequence of typha (typhaceae, poales) for understanding genome evolution in poaceae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Evolutionary implications of matK indels in Poaceae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Ancestral polyploidy in seed plants and angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The tobacco plastid accD gene is essential and is required for leaf development.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Inverted repeats in chloroplast DNA from higher plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

REPuter: the manifold applications of repeat analysis on a genomic scale

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

OrganellarGenomeDRAW--a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Classification and Biogeography of New World Grasses: Chloridoideae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A classification of the Chloridoideae (Poaceae) based on multi-gene phylogenetic trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A phylogeny and classification of the Muhlenbergiinae (Poaceae: Chloridoideae: Cynodonteae) based on plastid and nuclear DNA sequences.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A molecular phylogeny and classification of Leptochloa (Poaceae: Chloridoideae: Chlorideae) sensu lato and related genera.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A molecular phylogeny and classification of the Cteniinae, Farragininae, Gouiniinae, Gymnopogoninae, Perotidinae, and Trichoneurinae (Poaceae: Chloridoideae: Cynodonteae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A molecular phylogeny and new subgeneric classification of Sporobolus (Poaceae: Chloridoideae: Sporobolinae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

(2332) Proposal to conserve the name Sporobolus against Spartina, Crypsis, Ponceletia, and Heleochloa (Poaceae: Chloridoideae: Sporobolinae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

jModelTest: phylogenetic model averaging

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Dinosaur coprolites and the early evolution of grasses and grazers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Late Cretaceous origin of the rice tribe provides evidence for early diversification in Poaceae.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Conservation of plastid sequences in the plant nuclear genome for millions of years facilitates endosymbiotic evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Potential functional replacement of the plastidic acetyl-CoA carboxylase subunit (accD) gene by recent transfers to the nucleus in some angiosperm lineages.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Comparison of whole chloroplast genome sequences to choose noncoding regions for phylogenetic studies in angiosperms: the tortoise and the hare III

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Chloroplast DNA sequence utility for the lowest phylogenetic and phylogeographic inferences in angiosperms: the tortoise and the hare IV.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Tidal regime, salinity and salt marsh plant zonation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Phylogeny of the Bouteloua curtipendula Complex (Poaceae: Chloridoideae) Based on Nuclear Ribosomal and Plastid DNA Sequences from Diploid Taxa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Recent and recurrent polyploidy in Tragopogon (Asteraceae): cytogenetic, genomic and genetic comparisons

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A worldwide phylogenetic classification of the Poaceae (Gramineae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

C4 photosynthesis promoted species diversification during the Miocene grassland expansion

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Phylogenetic relationships and natural hybridization among the North American woody bamboos (Poaceae: Bambusoideae: Arundinaria).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The age of the grasses and clusters of origins of C4photosynthesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

The phylogeny of the BEP clade in grasses revisited: evidence from the whole-genome sequences of chloroplasts.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Automatic annotation of organellar genomes with DOGMA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

A multi-step comparison of short-read full plastome sequence assembly methods in grasses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Pattern and rate of indel evolution inferred from whole chloroplast intergenic regions in sugarcane, maize and rice.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

PAML 4: phylogenetic analysis by maximum likelihood

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

Uniformity of the nuclear and chloroplast genomes of Spartina maritima (Poaceae), a salt-marsh species in decline along the Western European Coast

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013

High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.06.013