(Q38190784)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

title

Evolution and biogeography of gymnosperms (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

0 references

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

author name string

Jin-Hua Ran

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

language of work or name

1 reference

22 February 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

Molecular Phylogenetics and Evolution

8 March 2020

number of pages

17

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

volume

75

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

page(s)

24-40

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24565948%20AND%20SRC:MED&resulttype=core&format=json

Molecular dating of the ‘Gondwanan’ plant family Proteaceae is only partially congruent with the timing of the break-up of Gondwana

8 March 2020

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7 January 2021

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7 January 2021

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Cycads: evolutionary innovations and the role of plant-derived neurotoxins

7 January 2021

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Phylogenetic Relationships Among the Genera of Taxodiaceae and Cupressaceae: Evidence from rbcL Sequences

7 January 2021

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7 January 2021

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Exploring Diversification and Genome Size Evolution in Extant Gymnosperms through Phylogenetic Synthesis

7 January 2021

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Slow but not low: genomic comparisons reveal slower evolutionary rate and higher dN/dS in conifers compared to angiosperms

7 January 2021

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A phylogenetic classification of the land plants to accompany APG III

7 January 2021

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Molecular phylogeny of extant gymnosperms and seed plant evolution: analysis of nuclear 18S rRNA sequences

7 January 2021

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Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers

7 January 2021

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A phylogeny of cycads (Cycadales) inferred from chloroplast matK gene, trnK intron, and nuclear rDNA ITS region

7 January 2021

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The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites

7 January 2021

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Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms

7 January 2021

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Phylogeny of Taxaceae and Cephalotaxaceae Genera Inferred from Chloroplast matK Gene and Nuclear rDNA ITS Region

7 January 2021

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A new classification and linear sequence of extant gymnosperms

7 January 2021

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Using phylogenomic patterns and gene ontology to identify proteins of importance in plant evolution

7 January 2021

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Establishing a time-scale for plant evolution

7 January 2021

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Generic relationships within and between the gymnosperm families Podocarpaceae and Phyllocladaceae based on an analysis of the chloroplast gene rbcL

7 January 2021

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Darwin's second 'abominable mystery': Why are there so many angiosperm species?

7 January 2021

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Cenozoic extinctions account for the low diversity of extant gymnosperms compared with angiosperms

7 January 2021

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Hypothesis testing in biogeography

7 January 2021

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Does the mode of plastid inheritance influence plastid genome architecture?

7 January 2021

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Plant evolution: pulses of extinction and speciation in gymnosperm diversity

7 January 2021

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The impact of outgroup choice and missing data on major seed plant phylogenetics using genome-wide EST data

7 January 2021

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Seed plant phylogeny: Demise of the anthophyte hypothesis?

7 January 2021

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Seed plant phylogeny and the origin of angiosperms: An experimental cladistic approach

7 January 2021

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Tibetan plateau aridification linked to global cooling at the Eocene-Oligocene transition

7 January 2021

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Phylogeny, historical biogeography, and patterns of diversification for Pinus (Pinaceae): phylogenetic tests of fossil-based hypotheses

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Increased seasonality through the Eocene to Oligocene transition in northern high latitudes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Multigene phylogeny of the green lineage reveals the origin and diversification of land plants.

7 January 2021

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The evolutionary history of the seed plant male gametophyte.

7 January 2021

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Diversity, origin, and distribution of retrotransposons (gypsy and copia) in conifers

7 January 2021

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Wilkinson support calculated with exact probabilities: an example using Floricaula/LEAFY amino acid sequences that compares three hypotheses involving gene gain/loss in seed plants.

7 January 2021

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Relationships within Cupressaceae sensu lato: a combined morphological and molecular approach

7 January 2021

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Evolutionary aspects of functional and pseudogene members of the phytochrome gene family in Scots pine

7 January 2021

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AFLP markers provide insights into the evolutionary relationships and diversification of New Caledonian Araucaria species (Araucariaceae).

7 January 2021

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Phylogeny and Classification of Pinus

7 January 2021

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Use of Simultaneous Analyses to Guide Fossil‐Based Calibrations of Pinaceae Phylogeny

7 January 2021

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Long-distance dispersal: a framework for hypothesis testing.

7 January 2021

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Recent Insights into Mechanisms of Genome Size Change in Plants

7 January 2021

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The evolutionary split of Pinaceae from other conifers: evidence from an intron loss and a multigene phylogeny.

7 January 2021

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Seed plant phylogeny: gnetophytes are derived conifers and a sister group to Pinaceae

7 January 2021

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Phylogeny and Biogeography of Tsuga (Pinaceae) Inferred from Nuclear Ribosomal ITS and Chloroplast DNA Sequence Data

7 January 2021

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TimeTree: a public knowledge-base of divergence times among organisms

7 January 2021

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Cataphylls of the Middle Triassic cycad Antarcticycas schopfii and new insights into cycad evolution

7 January 2021

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Origins of the southeastern Australian vegetation

7 January 2021

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Southern Conifers in Time and Space

7 January 2021

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The Families and Genera of Cycads: A Molecular Phylogenetic Analysis of Cycadophyta Based on Nuclear and Plastid DNA Sequences

7 January 2021

1 reference

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Complete nucleotide sequence of the Cryptomeria japonica D. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure of coniferous species

7 January 2021

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Chromosome identification and comparative karyotypic analyses of four Pinus species

7 January 2021

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Evolution of green plants as deduced from 5S rRNA sequences

7 January 2021

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Phylogenetic relationships in Ephedra (Ephedraceae) inferred from chloroplast and nuclear DNA sequences

7 January 2021

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Northern Hemisphere plant disjunctions: a window on tertiary land bridges and climate change?

7 January 2021

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A fossil-calibrated relaxed clock forEphedraindicates an Oligocene age for the divergence of Asian and New World clades and Miocene dispersal into South America

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Cooler winters as a possible cause of mass extinctions at the Eocene/Oligocene boundary.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Evolution of an ancient microsatellite hotspot in the conifer mitochondrial genome and comparison with other plants

7 January 2021

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Phylogenomics: the beginning of incongruence?

7 January 2021

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Ancestral polyploidy in seed plants and angiosperms

7 January 2021

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Phylogeny of Podocarpaceae: comparison of evidence from morphology and 18S rDNA.

7 January 2021

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ORIGINAL ARTICLE: Cycads in the insular South-west Pacific: dispersal or vicariance?

7 January 2021

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A lower Cretaceous (Valanginian) seed cone provides the earliest fossil record for Picea (Pinaceae).

7 January 2021

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Relaxed molecular clock provides evidence for long-distance dispersal of Nothofagus (southern beech)

7 January 2021

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Relationships within Podocarpaceae based on DNA sequence, anatomical, morphological, and biogeographical data

7 January 2021

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The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences

7 January 2021

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Comparative mapping in the Pinaceae

7 January 2021

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A functional phylogenomic view of the seed plants

7 January 2021

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Nuclear DNA C-values Complete Familial Representation in Gymnosperms

7 January 2021

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New species of Picea A. Dietrich (Pinaceae) from the middle Eocene of Axel Heiberg Island, Arctic Canada

7 January 2021

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Hemisphere-scale differences in conifer evolutionary dynamics

7 January 2021

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Comparative chloroplast genomics reveals the evolution of Pinaceae genera and subfamilies

7 January 2021

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Evolution and Circumscription of the True Cypresses (Cupressaceae: Cupressus)

7 January 2021

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Phylogenetic relationships and divergence times of the family Araucariaceae based on the DNA sequences of eight genes

7 January 2021

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A new phylogeny for the genus Picea from plastid, mitochondrial, and nuclear sequences

7 January 2021

1 reference

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Molecular analyses of MADS-box genes trace back to Gymnosperms the invention of fleshy fruits.

7 January 2021

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Gymnosperm B-sister genes may be involved in ovule/seed development and, in some species, in the growth of fleshy fruit-like structures

7 January 2021

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Towards decoding the conifer giga-genome

7 January 2021

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Relationships among seed plants inferred from highly conserved genes: sorting conflicting phylogenetic signals among ancient lineages

7 January 2021

1 reference

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Land plant evolutionary timeline: gene effects are secondary to fossil constraints in relaxed clock estimation of age and substitution rates

7 January 2021

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Diversification and biogeography of Juniperus (Cupressaceae): variable diversification rates and multiple intercontinental dispersals

7 January 2021

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Distribution of living Cupressaceae reflects the breakup of Pangea

7 January 2021

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Phylogenetic relationships among seed plants: Persistent questions and the limits of molecular data

7 January 2021

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A duplicate gene rooting of seed plants and the phylogenetic position of flowering plants.

7 January 2021

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Evidence for paternal transmission and heteroplasmy in the mitochondrial genome of Silene vulgaris, a gynodioecious plant

7 January 2021

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The complete plastid genome sequence of Welwitschia mirabilis: an unusually compact plastome with accelerated divergence rates

7 January 2021

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7 January 2021

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Ancient Wollemi Pines Resurgent

7 January 2021

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The Hows and Whys of Cytoplasmic Inheritance in Seed Plants

7 January 2021

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The Cenozoic palaeoenvironment of the Arctic Ocean

7 January 2021

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Evolution of genome size and complexity in Pinus

7 January 2021

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Recent synchronous radiation of a living fossil

7 January 2021

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Karyotype evolution in the Pinaceae: implication with molecular phylogeny

7 January 2021

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The Norway spruce genome sequence and conifer genome evolution

7 January 2021

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Chloroplast DNA rearrangements are more frequent when a large inverted repeat sequence is lost

7 January 2021

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The plant tree of life: an overview and some points of view

7 January 2021

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Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes

7 January 2021

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Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)

7 January 2021

1 reference

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Early Oligocene Callitris and Fitzroya (Cupressaceae) from Tasmania

7 January 2021

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A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Comparative genome mapping among Picea glauca, P. mariana × P. rubens and P. abies, and correspondence with other Pinaceae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Reticulate evolution in Thuja inferred from multiple gene sequences: implications for the study of biogeographical disjunction between eastern Asia and North America

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Cenozoic climate change shaped the evolutionary ecophysiology of the Cupressaceae conifers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

An Immunological Comparison of the Sciadopityaceae, Taxodiaceae, and Cupressaceae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogeny and biogeography of Cedrus (Pinaceae) inferred from sequences of seven paternal chloroplast and maternal mitochondrial DNA regions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Familial Concepts and Relationships in the Conifer Based on rbcL and matK Sequence Comparisons

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Differential methylation of genes and repeats in land plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Inference of higher-order relationships in the cycads from a large chloroplast data set.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Inference of higher-order conifer relationships from a multi-locus plastid data setThis paper is one of a selection of papers published in the Special Issue on Systematics Research

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Molecular phylogeny and biogeography of Picea (Pinaceae): implications for phylogeographical studies using cytoplasmic haplotypes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Fast evolution of the retroprocessed mitochondrial rps3 gene in Conifer II and further evidence for the phylogeny of gymnosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Lineage-specific group II intron gains and losses of the mitochondrial rps3 gene in gymnosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

A novel additional group II intron distinguishes the mitochondrial rps3 gene in gymnosperms.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

A white spruce gene catalog for conifer genome analyses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Monophyly of primary photosynthetic eukaryotes: green plants, red algae, and glaucophytes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Lignophyte Phylogeny and the Evolution of Spermatophytes: A Numerical Cladistic Analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Impact of missing data on phylogenies inferred from empirical phylogenomic data sets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Reconsidering Relationships among Stem and Crown Group Pinaceae: Oldest Record of the Genus Pinus from the Early Cretaceous of Yorkshire, United Kingdom

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Seed Plant Relationships and the Systematic Position of Gnetales Based on Nuclear and Chloroplast DNA: Conflicting Data, Rooting Problems, and the Monophyly of Conifers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogeny of the cycads based on multiple single-copy nuclear genes: congruence of concatenated parsimony, likelihood and species tree inference methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Error, bias, and long-branch attraction in data for two chloroplast photosystem genes in seed plants

7 January 2021

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Southern hemisphere biogeography inferred by event-based models: plant versus animal patterns

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Genomic diversity in forest trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

The evolution of gymnosperms redrawn by phytochrome genes: the Gnetatae appear at the base of the gymnosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Genomics: A spruce sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogenetic relationships within Araucariaceae based on rbcL gene sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

The phylogeny of land plants inferred from 18S rDNA sequences: pushing the limits of rDNA signal?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogeny of seed plants based on evidence from eight genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogenetic relationships of conifers inferred from partial 28S rRNA gene sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Observations on Ptyxis, Phenology, and Trichomes in the Cycadales and their Systematic Implications

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

A Formal Classification of the Extant Cycads

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Molecular phylogeny of cycads inferred from rbcL sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Gondwanan break-up: legacies of a lost world?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogeny and divergence times in Pinaceae: evidence from three genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Podocarpus totara var. waihoensis var. nov.: the Result of Introgressive Hybridisation between P. totara and P. acutifolius

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogenetic split of Larix : evidence from paternally inherited cpDNA trn T- trn F region

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Recolonization and radiation in Larix (Pinaceae): evidence from nuclear ribosomal DNA paralogues

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Molecular phylogeny and biogeography of Pseudotsuga (Pinaceae): insights into the floristic relationship between Taiwan and its adjacent areas.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Evolution of Eastern Asian and Eastern North American Disjunct Distributions in Flowering Plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Biogeography: Where do we go from here?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Fossil calibration of molecular divergence infers a moderate mutation rate and recent radiations for pinus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

MADS-box genes reveal that gnetophytes are more closely related to conifers than to flowering plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Dating dispersal and radiation in the gymnosperm Gnetum (Gnetales)--clock calibration when outgroup relationships are uncertain

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

The frequency of polyploid speciation in vascular plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Evolution of reduced and compact chloroplast genomes (cpDNAs) in gnetophytes: selection toward a lower-cost strategy.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Loss of different inverted repeat copies from the chloroplast genomes of Pinaceae and cupressophytes and influence of heterotachy on the evaluation of gymnosperm phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Chloroplast phylogenomics indicates that Ginkgo biloba is sister to cycads

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Phylogenomics and coalescent analyses resolve extant seed plant relationships

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

An index of substitution saturation and its application

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

High nrDNA ITS polymorphism in the ancient extant seed plant Cycas: incomplete concerted evolution and the origin of pseudogenes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Three genome-based phylogeny of Cupressaceae s.l.: further evidence for the evolution of gymnosperms and Southern Hemisphere biogeography

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Trends, Rhythms, and Aberrations in Global Climate 65 Ma to Present

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Large temperature drop across the Eocene-Oligocene transition in central North America

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

How well do we understand the overall backbone of cycad phylogeny? New insights from a large, multigene plastid data set.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Highly conserved low-copy nuclear genes as effective markers for phylogenetic analyses in angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

The position of gnetales among seed plants: overcoming pitfalls of chloroplast phylogenomics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

‘Out-of-Africa’ dispersal of tropical floras during the Miocene climatic optimum: evidence from Uvaria (Annonaceae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Pine nut syndrome: a simple test for genome size of 12 pine nut–producing trees links the bitter aftertaste to nuts of P. armandii Zucc. ex Endl

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005

Chloroplast DNA of black pine retains a residual inverted repeat lacking rRNA genes: nucleotide sequences of trnQ, trnK, psbA, trnI and trnH and the absence of rps16

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.02.005