(Q60944020)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30612035%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

title

The Phosphoinositide Kinase PIKfyve Promotes Cathepsin-S-Mediated Major Histocompatibility Complex Class II Antigen Presentation (English)

1 reference

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17 April 2020

2

1 reference

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17 April 2020

Ilse Dingjan

7

1 reference

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17 April 2020

Geert van den Bogaart

13

1 reference

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17 April 2020

11

Carolyn R Bertozzi

1 reference

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17 April 2020

1

Maksim V Baranov

1 reference

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17 April 2020

8

Martin Ter Beest

1 reference

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17 April 2020

author name string

Anastasiya Schirmacher

3

1 reference

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17 April 2020

Melissa A C van Aart

4

1 reference

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17 April 2020

Sjors Maassen

5

1 reference

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17 April 2020

Elke M Muntjewerff

6

1 reference

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17 April 2020

Martijn Verdoes

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30612035%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

Samantha G L Keyser

10

1 reference

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17 April 2020

Ulf Diederichsen

12

1 reference

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17 April 2020

language of work or name

English

0 references

publication date

20 December 2018

1 reference

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17 April 2020

volume

11

1 reference

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17 April 2020

page(s)

160-177

1 reference

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CalFluors: A Universal Motif for Fluorogenic Azide Probes across the Visible Spectrum.

17 April 2020

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Loss of PIKfyve in platelets causes a lysosomal disease leading to inflammation and thrombosis in mice

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Alternative activation of macrophages by IL-4 enhances the proteolytic capacity of their phagosomes through synergistic mechanisms

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Spatial separation of HLA-DM/HLA-DR interactions within MIIC and phagosome-induced immune escape.

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PIKfyve Regulates Vacuole Maturation and Nutrient Recovery following Engulfment.

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Cysteine Proteases: Modes of Activation and Future Prospects as Pharmacological Targets

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SWAP70 Organizes the Actin Cytoskeleton and Is Essential for Phagocytosis.

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Cathepsin S required for normal MHC class II peptide loading and germinal center development

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Cysteine cathepsins: from structure, function and regulation to new frontiers

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Early endosomal maturation of MHC class II molecules independently of cysteine proteases and H-2DM.

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Control of Phagocytosis by Microbial Pathogens.

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CORVET and HOPS tethering complexes - coordinators of endosome and lysosome fusion

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The PX domains of p47phox and p40phox bind to lipid products of PI(3)K

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5 October 2022

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Core protein machinery for mammalian phosphatidylinositol 3,5-bisphosphate synthesis and turnover that regulates the progression of endosomal transport. Novel Sac phosphatase joins the ArPIKfyve-PIKfyve complex

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Lipid peroxidation causes endosomal antigen release for cross-presentation

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PIKfyve, MTMR3 and their product PtdIns5P regulate cancer cell migration and invasion through activation of Rac1.

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Phagosomal proteolysis in dendritic cells is modulated by NADPH oxidase in a pH-independent manner

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Quantification of Bioorthogonal Stability in Immune Phagocytes Using Flow Cytometry Reveals Rapid Degradation of Strained Alkynes.

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NOX2 Controls Phagosomal pH to Regulate Antigen Processing during Crosspresentation by Dendritic Cells

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Inhibition of the PtdIns(5) kinase PIKfyve disrupts intracellular replication of Salmonella

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5 October 2022

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Cathepsin S activity regulates antigen presentation and immunity

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5 October 2022

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B-cell non-Hodgkin lymphoma: Selective vulnerability to PIKFYVE inhibition

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Bioorthogonal deprotection on the dendritic cell surface for chemical control of antigen cross-presentation.

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Apilimod inhibits the production of IL-12 and IL-23 and reduces dendritic cell infiltration in psoriasis

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5 October 2022

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Phosphatidylinositol 3,5-bisphosphate: low abundance, high significance

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5 October 2022

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Reactive oxygen species production in the phagosome: impact on antigen presentation in dendritic cells

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5 October 2022

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Robust lysosomal calcium signaling through channel TRPML1 is impaired by lysosomal lipid accumulation.

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5 October 2022

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Reduction of disulfide bonds during antigen processing: evidence from a thiol-dependent insulin determinant

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5 October 2022

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A polymorphic pocket at the P10 position contributes to peptide binding specificity in class II MHC proteins

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5 October 2022

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Proteolysis in MHC class II antigen presentation: who's in charge?

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5 October 2022

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Pathways of antigen processing

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5 October 2022

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PIKfyve lipid kinase is a protein kinase: downregulation of 5'-phosphoinositide product formation by autophosphorylation

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5 October 2022

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A step-by-step overview of the dynamic process of epitope selection by major histocompatibility complex class II for presentation to helper T cells

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5 October 2022

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Major histocompatibility complex class II molecules induce the formation of endocytic MIIC-like structures

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5 October 2022

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Plentiful PtdIns5P from scanty PtdIns(3,5)P2 or from ample PtdIns? PIKfyve-dependent models: Evidence and speculation (response to: DOI 10.1002/bies.201300012).

1 reference

5 October 2022

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Defective TCR expression in transgenic mice constructed using cDNA-based α- and β-chain genes under the control of heterologous regulatory elements

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5 October 2022

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Phosphoinositides in phagocytosis and macropinocytosis

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5 October 2022

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Functional dissociation between PIKfyve-synthesized PtdIns5P and PtdIns(3,5)P2 by means of the PIKfyve inhibitor YM201636

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5 October 2022

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PtdIns(3)P regulates the neutrophil oxidase complex by binding to the PX domain of p40phox

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5 October 2022

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Redirecting soluble antigen for MHC class I cross-presentation during phagocytosis

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5 October 2022

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Two-gene control of the expression of a murine Ia antigen

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Mammalian cell morphology and endocytic membrane homeostasis require enzymatically active phosphoinositide 5-kinase PIKfyve

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

NADPH oxidase activity controls phagosomal proteolysis in macrophages through modulation of the lumenal redox environment of phagosomes

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Selective abrogation of Th1 response by STA-5326, a potent IL-12/IL-23 inhibitor.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

How nascent phagosomes mature to become phagolysosomes

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Activation of lysosomal function during dendritic cell maturation

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5 October 2022

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Vinyl sulfones as mechanism-based cysteine protease inhibitors

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Invariant chain distinguishes between the exogenous and endogenous antigen presentation pathways

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PIKfyve activity regulates reformation of terminal storage lysosomes from endolysosomes

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Invariant chain cleavage and peptide loading in major histocompatibility complex class II vesicles

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5 October 2022

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SWAP70 is a universal GEF-like adapter for tethering actin to phagosomes.

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5 October 2022

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VAMP8-mediated NOX2 recruitment to endosomes is necessary for antigen release

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Antigen processing and class II MHC peptide-loading compartments in human B-lymphoblastoid cells

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Essential roles of PIKfyve and PTEN on phagosomal phosphatidylinositol 3-phosphate dynamics

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Phosphatidylinositol 3-phosphate is generated in phagosomal membranes.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

The signaling lipid PI(3,5)P₂ stabilizes V₁-V(o) sector interactions and activates the V-ATPase

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Comparative quantitative mass spectrometry analysis of MHC class II-associated peptides reveals a role of GILT in formation of self-peptide repertoire

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5 October 2022

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Active vacuolar H+ ATPase and functional cycle of Rab5 are required for the vacuolation defect triggered by PtdIns(3,5)P2 loss under PIKfyve or Vps34 deficiency

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Isolation and characterization of the intracellular MHC class II compartment.

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5 October 2022

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The phagosome and redox control of antigen processing.

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5 October 2022

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Essential role for cathepsin S in MHC class II-associated invariant chain processing and peptide loading

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

PIKfyve inhibition interferes with phagosome and endosome maturation in macrophages.

0 references

Extensive trafficking of MHC class II-invariant chain complexes in the endocytic pathway and appearance of peptide-loaded class II in multiple compartments

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

The Optimization of Bioorthogonal Epitope Ligation within MHC-I Complexes

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YM201636, an inhibitor of retroviral budding and PIKfyve-catalyzed PtdIns(3,5)P2 synthesis, halts glucose entry by insulin in adipocytes

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Inhibition of c-Rel DNA binding is critical for the anti-inflammatory effects of novel PIKfyve inhibitor.

0 references

Rab27a regulates phagosomal pH and NADPH oxidase recruitment to dendritic cell phagosomes.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

MHC class II molecules on the move for successful antigen presentation

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Role of phosphatidylinositol 3-kinase and Rab5 effectors in phagosomal biogenesis and mycobacterial phagosome maturation arrest

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Cathepsin S from bovine spleen. Purification, distribution, intracellular localization and action on proteins.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Transient accumulation of new class II MHC molecules in a novel endocytic compartment in B lymphocytes

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Randomized, double-blind, placebo-controlled trial of the oral interleukin-12/23 inhibitor apilimod mesylate for treatment of active Crohn's disease

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Phosphatidylinositol-3,5-bisphosphate: no longer the poor PIP2.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Lysosomal cysteine proteases regulate antigen presentation

1 reference

5 October 2022

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NADPH oxidase modifies patterns of MHC class II-restricted epitopic repertoires through redox control of antigen processing

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5 October 2022

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PIKfyve, a class III lipid kinase, is required for TLR-induced type I IFN production via modulation of ATF3.

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Divergent paths for the selection of immunodominant epitopes from distinct antigenic sources

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5 October 2022

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The ins and outs of MHC class II-mediated antigen processing and presentation

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Brief report: a phase IIa, randomized, double-blind, placebo-controlled trial of apilimod mesylate, an interleukin-12/interleukin-23 inhibitor, in patients with rheumatoid arthritis

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Assembly and intracellular transport of HLA-DM and correction of the class II antigen-processing defect in T2 cells

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Activation and assembly of the NADPH oxidase: a structural perspective

1 reference

5 October 2022

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Antimicrobial mechanisms of phagocytes and bacterial evasion strategies

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5 October 2022

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PIKfyve: the road to PtdIns 5-P and PtdIns 3,5-P(2)

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Dendritic cells and the control of immunity

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Inhibition of endosomal proteolytic activity by leupeptin blocks surface expression of MHC class II molecules and their conversion to SDS resistance alpha beta heterodimers in endosomes

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5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Improved quenched fluorescent probe for imaging of cysteine cathepsin activity

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Avoiding horror autotoxicus: the importance of dendritic cells in peripheral T cell tolerance

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

pH of endophagosomes controls association of their membranes with Vps34 and PtdIns(3)P levels.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Phagosome maturation: going through the acid test

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

A molecular mechanism to regulate lysosome motility for lysosome positioning and tubulation.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

APP controls the formation of PI(3,5)P(2) vesicles through its binding of the PIKfyve complex

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Regulation of Th2 Cell Immunity by Dendritic Cells

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Oxidized phagosomal NOX2 complex is replenished from lysosomes.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

PI(3,5)P2 controls membrane trafficking by direct activation of mucolipin Ca2+ release channels in the endolysosome

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

PtdIns3P and Rac direct the assembly of the NADPH oxidase on a novel, pre-phagosomal compartment during FcR-mediated phagocytosis in primary mouse neutrophils

0 references

Phosphatidylinositol 3-phosphate-interacting domains in PIKfyve. Binding specificity and role in PIKfyve. Endomenbrane localization

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Cathepsins and compartmentalization in antigen presentation

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Lifeact: a versatile marker to visualize F-actin

0 references

Cross-presentation by dendritic cells

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

A selective PIKfyve inhibitor blocks PtdIns(3,5)P(2) production and disrupts endomembrane transport and retroviral budding

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

The Lipid Kinase PIKfyve Coordinates the Neutrophil Immune Response through the Activation of the Rac GTPase

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

PIKfyve, a class III PI kinase, is the target of the small molecular IL-12/IL-23 inhibitor apilimod and a player in Toll-like receptor signaling

0 references

Lysosomal Degradation Is Required for Sustained Phagocytosis of Bacteria by Macrophages.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Crystal structure of the human class II MHC protein HLA-DR1 complexed with an influenza virus peptide

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Modulation of Rab5 and Rab7 recruitment to phagosomes by phosphatidylinositol 3-kinase.

0 references

NADPH oxidase controls phagosomal pH and antigen cross-presentation in human dendritic cells.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Toll receptor-mediated regulation of NADPH oxidase in human dendritic cells.

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Calcium: a fundamental regulator of intracellular membrane fusion?

0 references

Impaired invariant chain degradation and antigen presentation and diminished collagen-induced arthritis in cathepsin S null mice

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Molecular imaging analysis of Rab GTPases in the regulation of phagocytosis and macropinocytosis

1 reference

5 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

One of two unstructured domains of Ii becomes ordered in complexes with MHC class II molecules

0 references

Visualization of retroviral replication in living cells reveals budding into multivesicular bodies.

0 references

Phosphatidylinositol 3,5-bisphosphate and Fab1p/PIKfyve underPPIn endo-lysosome function

0 references

Localization of phosphatidylinositol 3-phosphate in yeast and mammalian cells

1 reference

8 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

The cell biology of phagocytosis

1 reference

8 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

A phase 1/2A trial of STA 5326, an oral interleukin-12/23 inhibitor, in patients with active moderate to severe Crohn's disease

1 reference

8 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.ISCI.2018.12.015

Identifiers

DOI

10.1016/J.ISCI.2018.12.015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30612035%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30612035%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

1 reference