(Q90250455)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

title

Beta-binomial modeling of CRISPR pooled screen data identifies target genes with greater sensitivity and fewer false negatives (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

1 reference

Seon Young Kim

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

Maxime W C Rousseaux

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

Huda Y Zoghbi

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

publication date

23 April 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

volume

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

page(s)

999-1008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

Differential expression in SAGE: accounting for normal between-library variation.

12 April 2020

cites work

1 reference

12 December 2020

A resource for large-scale RNA-interference-based screens in mammals.

1 reference

12 December 2020

A probability-based approach for the analysis of large-scale RNAi screens.

1 reference

12 December 2020

Profiling essential genes in human mammary cells by multiplex RNAi screening

1 reference

12 December 2020

Cancer proliferation gene discovery through functional genomics.

1 reference

12 December 2020

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

1 reference

12 December 2020

Highly parallel identification of essential genes in cancer cells

1 reference

12 December 2020

A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene

1 reference

12 December 2020

Differential expression analysis for sequence count data

1 reference

12 December 2020

Efficient counting of k-mers in DNA sequences using a bloom filter

1 reference

12 December 2020

A primer on using pooled shRNA libraries for functional genomic screens

1 reference

12 December 2020

Fast gapped-read alignment with Bowtie 2

1 reference

12 December 2020

ATARiS: computational quantification of gene suppression phenotypes from multisample RNAi screens

1 reference

12 December 2020

RAS-MAPK-MSK1 pathway modulates ataxin 1 protein levels and toxicity in SCA1

1 reference

12 December 2020

Genetic screens in human cells using the CRISPR-Cas9 system

1 reference

12 December 2020

Genome-scale CRISPR-Cas9 knockout screening in human cells

1 reference

12 December 2020

Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA library

1 reference

12 December 2020

High-throughput screening of a CRISPR/Cas9 library for functional genomics in human cells

1 reference

12 December 2020

Measuring error rates in genomic perturbation screens: gold standards for human functional genomics

1 reference

12 December 2020

Improved vectors and genome-wide libraries for CRISPR screening

1 reference

12 December 2020

RNAi screening comes of age: improved techniques and complementary approaches

1 reference

12 December 2020

Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation

1 reference

12 December 2020

HiTSelect: a comprehensive tool for high-complexity-pooled screen analysis

1 reference

12 December 2020

MAGeCK enables robust identification of essential genes from genome-scale CRISPR/Cas9 knockout screens

1 reference

12 December 2020

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

12 December 2020

Sequence determinants of improved CRISPR sgRNA design

1 reference

12 December 2020

A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks

1 reference

12 December 2020

ScreenBEAM: a novel meta-analysis algorithm for functional genomics screens via Bayesian hierarchical modeling

1 reference

12 December 2020

Current strategies for mutation detection in phenotype-driven screens utilising next generation sequencing

1 reference

12 December 2020

High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities.

1 reference

12 December 2020

Quality control, modeling, and visualization of CRISPR screens with MAGeCK-VISPR.

1 reference

12 December 2020

An interactive web-based application for Comprehensive Analysis of RNAi-screen Data

1 reference

12 December 2020

CRISPR knockout screening outperforms shRNA and CRISPRi in identifying essential genes.

1 reference

12 December 2020

Genomic Copy Number Dictates a Gene-Independent Cell Response to CRISPR/Cas9 Targeting

1 reference

12 December 2020

Functional CRISPR screening identifies the ufmylation pathway as a regulator of SQSTM1/p62

1 reference

12 December 2020

Compact and highly active next-generation libraries for CRISPR-mediated gene repression and activation.

1 reference

12 December 2020

An Argonaute phosphorylation cycle promotes microRNA-mediated silencing.

1 reference

12 December 2020

CRISPRcloud: A secure cloud-based pipeline for CRISPR pooled screen deconvolution

1 reference

12 December 2020

A permutation-based non-parametric analysis of CRISPR screen data.

1 reference

12 December 2020

PinAPL-Py: A comprehensive web-application for the analysis of CRISPR/Cas9 screens

1 reference

12 December 2020

Am I ready for CRISPR? A user's guide to genetic screens

1 reference

12 December 2020

Genome-wide CRISPR-KO Screen Uncovers mTORC1-Mediated Gsk3 Regulation in Naive Pluripotency Maintenance and Dissolution

1 reference

12 December 2020

Unsupervised correction of gene-independent cell responses to CRISPR-Cas9 targeting

1 reference

12 December 2020

Optimized libraries for CRISPR-Cas9 genetic screens with multiple modalities

1 reference

12 December 2020

Identifiers

DOI

10.1101/GR.245571.118

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31015259%20AND%20SRC:MED&resulttype=core&format=json

12 April 2020

PubMed publication ID

31015259

1 reference