(Q38615264)

2 October 2017

Dereplication, sequencing and identification of peptidic natural products: from genome mining to peptidogenomics to spectral networks (English)

1 reference

2 October 2017

1 reference

1

Hosein Mohimani

1 reference

2 October 2017

2

Pavel A Pevzner

1 reference

2 October 2017

26 October 2015

1 reference

2 October 2017

Natural Product Reports

1 reference

2 October 2017

33

1 reference

2 October 2017

1

1 reference

2 October 2017

73-86

1 reference

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

The re-emergence of natural products for drug discovery in the genomics era.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

A new antibiotic kills pathogens without detectable resistance

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

The generating function approach for Peptide identification in spectral networks

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

MS-GF+ makes progress towards a universal database search tool for proteomics

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Pep2Path: automated mass spectrometry-guided genome mining of peptidic natural products

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Automated genome mining of ribosomal peptide natural products

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Mass spectrometry of natural products: current, emerging and future technologies

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Dereplication of microbial extracts and related analytical technologies

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Optimization and testing of mass spectral library search algorithms for compound identification

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

CYCLONE--a utility for de novo sequencing of microbial cyclic peptides.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

A new approach to evaluating statistical significance of spectral identifications

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

ThioFinder: a web-based tool for the identification of thiopeptide gene clusters in DNA sequences

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Precursor-centric genome-mining approach for lasso peptide discovery

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Mass spectral molecular networking of living microbial colonies

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Bacterial biosynthesis and maturation of the didemnin anti-cancer agents.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Fast multi-blind modification search through tandem mass spectrometry

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

KEGG for integration and interpretation of large-scale molecular data sets

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Multiplex de novo sequencing of peptide antibiotics

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

A mass spectrometry-guided genome mining approach for natural product peptidogenomics

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Cycloquest: identification of cyclopeptides via database search of their mass spectra against genome databases

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Sequencing cyclic peptides by multistage mass spectrometry

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

NRPSpredictor2--a web server for predicting NRPS adenylation domain specificity

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Genome mining for ribosomally synthesized natural products

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

MassBank: a public repository for sharing mass spectral data for life sciences

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

BAGEL2: mining for bacteriocins in genomic data

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

In silico fragmentation for computer assisted identification of metabolite mass spectra

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

LC-high resolution MS in environmental analysis: from target screening to the identification of unknowns

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Follow the leader: the use of leader peptides to guide natural product biosynthesis.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Spectral library searching for peptide identification via tandem MS.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Ribosomal peptide natural products: bridging the ribosomal and nonribosomal worlds

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Dereplication and de novo sequencing of nonribosomal peptides

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Automated genome mining for natural products.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

HMDB: a knowledgebase for the human metabolome

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

BACTIBASE: a new web-accessible database for bacteriocin characterization

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

NORINE: a database of nonribosomal peptides

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Protein identification by spectral networks analysis

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Development and validation of a spectral library searching method for peptide identification from MS/MS.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Using annotated peptide mass spectrum libraries for protein identification

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

METLIN: a metabolite mass spectral database

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Identification of post-translational modifications by blind search of mass spectra.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

PepNovo: de novo peptide sequencing via probabilistic network modeling

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Chemical derivatization and mass spectral libraries in metabolic profiling by GC/MS and LC/MS/MS.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Nonribosomal peptides: from genes to products

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Modular Peptide Synthetases Involved in Nonribosomal Peptide Synthesis

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Efficiency of database search for identification of mutated and modified proteins via mass spectrometry

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Probability-based protein identification by searching sequence databases using mass spectrometry data

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

De novo peptide sequencing via tandem mass spectrometry

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

The specificity-conferring code of adenylation domains in nonribosomal peptide synthetases

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

The critical evaluation of a comprehensive mass spectral library

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Highly diverse cyanobactins in strains of the genus Anabaena.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Interpreting top-down mass spectra using spectral alignment.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Discovery of a new peptide natural product by Streptomyces coelicolor genome mining

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Mutation-tolerant protein identification by mass spectrometry

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Coelichelin, a new peptide siderophore encoded by the Streptomyces coelicolor genome: structure prediction from the sequence of its non-ribosomal peptide synthetase

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590107

Computational mass spectrometry for small molecules

31 August 2018

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1186/1758-2946-5-12

MetFusion: integration of compound identification strategies

2 January 2022

1 reference

5 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1002/JMS.3123

ChemSpider: An Online Chemical Information Resource

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1021/ED100697W

Metabolite Identification through Machine Learning- Tackling CASMI Challenge Using FingerID

10 July 2022

1 reference

24 October 2022

https://opencitations.net/index/coci/api/v1/citations/10.3390/METABO3020484

Interspecies interactions stimulate diversification of the Streptomyces coelicolor secreted metabolome

1 reference

12 April 2024

https://opencitations.net/index/api/v1/citations/10.1128/MBIO.00459-13

Competitive fragmentation modeling of ESI-MS/MS spectra for putative metabolite identification

2 references

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1007/S11306-014-0676-4

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Algorithms for the de novo sequencing of peptides from tandem mass spectra

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Automatic chemical structure annotation of an LC-MS(n) based metabolic profile from green tea.

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1021/AC400861A

A roadmap for natural product discovery based on large-scale genomics and metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Molecular networking as a dereplication strategy

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Structural investigation of ribosomally synthesized natural products by hypothetical structure enumeration and evaluation using tandem MS.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Minimum Information about a Biosynthetic Gene cluster.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Molecular cartography of the human skin surface in 3D

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

SBSPKS: structure based sequence analysis of polyketide synthases

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Multi-spectra peptide sequencing and its applications to multistage mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Low-molecular-weight post-translationally modified microcins.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

The dendral project: recent advances in computer- assisted structure elucidation

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Drug discovery and natural products: end of an era or an endless frontier?

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

TOPOLOGICAL MAPPING OF ORGANIC MOLECULES.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

PubChem: Integrated Platform of Small Molecules and Biological Activities

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

MIDDAS-M: motif-independent de novo detection of secondary metabolite gene clusters through the integration of genome sequencing and transcriptome data

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Advances in structure elucidation of small molecules using mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Computational mass spectrometry for metabolomics: identification of metabolites and small molecules

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1007/S00216-010-4142-5

MIDAS: a database-searching algorithm for metabolite identification in metabolomics.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Implementation and uses of automated de novo peptide sequencing by tandem mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

CycloBranch: De Novo Sequencing of Nonribosomal Peptides from Accurate Product Ion Mass Spectra

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

CLUSEAN: a computer-based framework for the automated analysis of bacterial secondary metabolite biosynthetic gene clusters

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

SMURF: Genomic mapping of fungal secondary metabolite clusters

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Aggressive dereplication using UHPLC-DAD-QTOF: screening extracts for up to 3000 fungal secondary metabolites

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Kutznerides 1-4, depsipeptides from the actinomycete Kutzneria sp. 744 inhabiting mycorrhizal roots of Picea abies seedlings

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

CFM-ID: a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1093/NAR/GKU436

Quantitative molecular networking to profile marine cyanobacterial metabolomes

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

MS/MS networking guided analysis of molecule and gene cluster families.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

MS/MS-based networking and peptidogenomics guided genome mining revealed the stenothricin gene cluster in Streptomyces roseosporus

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

An environmental bacterial taxon with a large and distinct metabolic repertoire

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Interkingdom metabolic transformations captured by microbial imaging mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Metabolite identification and quantitation in LC-MS/MS-based metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

ASMPKS: an analysis system for modular polyketide synthases

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Automated de novo protein sequencing of monoclonal antibodies

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Using fragmentation trees and mass spectral trees for identifying unknown compounds in metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

The colibactin warhead crosslinks DNA.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Improved lanthipeptide detection and prediction for antiSMASH

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1039/C5NP00050E

Identifiers

DOI

10.1039/C5NP00050E

1 reference

2 October 2017

1 reference

PMC publication ID

5590107

2 October 2017

PubMed publication ID

26497201

1 reference

PMC publication ID

5590107